Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Gm44843-201ENSMUST00000208320 1396 ntBASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 AC156790.4-202ENSMUST00000228838 1418 ntBASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb20Q91XZ9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm12664-201ENSMUST00000118306 913 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Klra14-ps-201ENSMUST00000119532 802 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm19791-201ENSMUST00000180398 859 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm38201-201ENSMUST00000192143 387 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm44392-201ENSMUST00000196758 115 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm43708-201ENSMUST00000198857 961 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb20Q91XZ9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Tnfrsf22-204ENSMUST00000171066 1780 ntBASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb20Q91XZ9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm14943-201ENSMUST00000118056 546 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm11817-201ENSMUST00000155578 685 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm22143-201ENSMUST00000157401 203 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms