Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc9Q8VC31 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc9Q8VC31 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc9Q8VC31 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc9Q8VC31 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Gm19165-201ENSMUST00000204453 1982 ntBASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Gm2810-201ENSMUST00000118681 990 ntBASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Gm2213-201ENSMUST00000197485 688 ntBASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Gm19931-201ENSMUST00000198920 368 ntBASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc9Q8VC31 Gm26660-202ENSMUST00000223620 4112 ntBASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Gm26684-202ENSMUST00000228229 8257 ntBASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 AC123738.2-201ENSMUST00000223791 1899 ntBASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Gm2238-201ENSMUST00000192074 3669 ntBASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc9Q8VC31 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms