Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.52□□□□□ -0.57
Ebf4Q8K4J2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm44335-201ENSMUST00000196879 141 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm44297-201ENSMUST00000198304 141 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm44346-201ENSMUST00000198851 141 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf4Q8K4J2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gm8410-201ENSMUST00000117225 605 ntBASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gm24158-201ENSMUST00000175263 71 ntBASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms