Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Gm21092-201ENSMUST00000178995 955 ntBASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Gm29410-201ENSMUST00000188383 694 ntBASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Gm18059-201ENSMUST00000208073 580 ntBASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 AC154257.1-202ENSMUST00000224729 843 ntBASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Col23a1Q8K4G2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gm11836-201ENSMUST00000121022 441 ntBASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gm13022-201ENSMUST00000121181 285 ntBASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gm18463-201ENSMUST00000207258 474 ntBASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col23a1Q8K4G2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Gm15744-201ENSMUST00000161734 213 ntBASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 AC102368.1-201ENSMUST00000227161 892 ntBASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Gm8894-201ENSMUST00000074642 666 ntBASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.17■□□□□ 0.02
Col23a1Q8K4G2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm25076-201ENSMUST00000104098 132 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm25063-201ENSMUST00000104666 94 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm12579-201ENSMUST00000118040 783 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm8731-201ENSMUST00000118088 412 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm43610-201ENSMUST00000199117 365 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms