Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rtn1Q8K0T0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rtn1Q8K0T0 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.64□□□□□ -0.07
Rtn1Q8K0T0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rtn1Q8K0T0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Rtn1Q8K0T0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rtn1Q8K0T0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Gm11964-201ENSMUST00000120982 444 ntBASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Gm26035-201ENSMUST00000083065 308 ntBASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rtn1Q8K0T0 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm12742-201ENSMUST00000117326 410 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm23958-201ENSMUST00000157207 105 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm24548-201ENSMUST00000158650 108 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm38002-201ENSMUST00000193255 180 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm43133-201ENSMUST00000197472 463 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm5904-201ENSMUST00000210286 865 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rtn1Q8K0T0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rtn1Q8K0T0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms