Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip4Q8CI96 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip4Q8CI96 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.77□□□□□ -0.37
Clip4Q8CI96 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip4Q8CI96 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.77□□□□□ -0.37
Clip4Q8CI96 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip4Q8CI96 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clip4Q8CI96 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.77□□□□□ -0.37
Clip4Q8CI96 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.76□□□□□ -0.37
Clip4Q8CI96 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.76□□□□□ -0.37
Clip4Q8CI96 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clip4Q8CI96 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Gm12742-201ENSMUST00000117326 410 ntBASIC12.75□□□□□ -0.37
Clip4Q8CI96 Gm13123-201ENSMUST00000122173 492 ntBASIC12.75□□□□□ -0.37
Clip4Q8CI96 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.75□□□□□ -0.37
Clip4Q8CI96 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.75□□□□□ -0.37
Clip4Q8CI96 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.75□□□□□ -0.37
Clip4Q8CI96 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.75□□□□□ -0.37
Clip4Q8CI96 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clip4Q8CI96 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clip4Q8CI96 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clip4Q8CI96 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clip4Q8CI96 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip4Q8CI96 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.74□□□□□ -0.37
Clip4Q8CI96 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip4Q8CI96 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip4Q8CI96 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip4Q8CI96 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms