Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Gm20949-201ENSMUST00000206478 952 ntBASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28aQ8CEI3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Gm7063-201ENSMUST00000186840 981 ntBASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc28aQ8CEI3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Gm11618-201ENSMUST00000117946 267 ntBASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Gm14704-201ENSMUST00000120300 874 ntBASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc28aQ8CEI3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms