Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Gm14057-201ENSMUST00000120631 482 ntBASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lysmd4Q8CC84 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lysmd4Q8CC84 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lysmd4Q8CC84 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms