Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Gm11222-201ENSMUST00000119005 738 ntBASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Gm14726-201ENSMUST00000120623 896 ntBASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shisa4Q8CA71 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Gm14263-201ENSMUST00000117955 746 ntBASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Mir6979-201ENSMUST00000183927 56 ntBASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.62□□□□□ -0.07
Shisa4Q8CA71 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.62□□□□□ -0.07
Shisa4Q8CA71 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Gm28882-201ENSMUST00000185504 314 ntBASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Shisa4Q8CA71 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Gm29787-201ENSMUST00000222129 849 ntBASIC14.6□□□□□ -0.07
Shisa4Q8CA71 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms