Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Gm16379-201ENSMUST00000161469 348 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Gm27514-201ENSMUST00000183692 110 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Gm8762-201ENSMUST00000193486 339 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm23931-201ENSMUST00000103842 109 ntBASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Mir1982-201ENSMUST00000157368 74 ntBASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm8018-201ENSMUST00000173536 789 ntBASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Gm22058-201ENSMUST00000083393 310 ntBASIC13.93□□□□□ -0.18
Trim9Q8C7M3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim9Q8C7M3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Gm5781-201ENSMUST00000219792 443 ntBASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms