Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Gm14921-201ENSMUST00000118643 908 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm6407-201ENSMUST00000176468 549 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Mir6958-201ENSMUST00000184207 73 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm38210-201ENSMUST00000191944 809 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Mir6546-201ENSMUST00000184460 62 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm37905-201ENSMUST00000195310 341 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm18038-201ENSMUST00000197900 485 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Gm45550-201ENSMUST00000209380 946 ntBASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a6Q8C6K9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.4□□□□□ -0.59
Col6a6Q8C6K9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm9358-201ENSMUST00000183067 927 ntBASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms