Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Gm13829-201ENSMUST00000119600 138 ntBASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Gm18187-201ENSMUST00000196476 984 ntBASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Gm8099-201ENSMUST00000200510 742 ntBASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Gm14660-201ENSMUST00000119809 575 ntBASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf3Q8C120 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Gm13226-201ENSMUST00000117838 404 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Gm38092-201ENSMUST00000195600 653 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms