Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm13829-201ENSMUST00000119600 138 ntBASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm12502-201ENSMUST00000120197 444 ntBASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm7809-201ENSMUST00000153199 742 ntBASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm45784-201ENSMUST00000188360 142 ntBASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm24231-201ENSMUST00000104315 133 ntBASIC13.03□□□□□ -0.32
Trub1Q8C0D0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm8738-201ENSMUST00000172606 329 ntBASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trub1Q8C0D0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trub1Q8C0D0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trub1Q8C0D0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trub1Q8C0D0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trub1Q8C0D0 Daam2-202ENSMUST00000224595 1926 ntBASIC13.02□□□□□ -0.32
Trub1Q8C0D0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trub1Q8C0D0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trub1Q8C0D0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Gm15824-201ENSMUST00000119516 955 ntBASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Gm3890-201ENSMUST00000182416 207 ntBASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Gm18187-201ENSMUST00000196476 984 ntBASIC13.02□□□□□ -0.33
Trub1Q8C0D0 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms