Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm11Q8BUV6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm17983-201ENSMUST00000190766 594 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm42550-201ENSMUST00000201553 960 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm44872-201ENSMUST00000207864 420 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm45276-201ENSMUST00000209549 1086 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Lsm11Q8BUV6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm11Q8BUV6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Mir686-201ENSMUST00000102174 109 ntBASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm29667-201ENSMUST00000190817 490 ntBASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.89□□□□□ -0.67
Lsm11Q8BUV6 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms