Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Gm21854-201ENSMUST00000179901 471 ntBASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Gm28631-201ENSMUST00000190740 334 ntBASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smndc1Q8BGT7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.33□□□□□ -0.43
Smndc1Q8BGT7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smndc1Q8BGT7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Smndc1Q8BGT7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Smndc1Q8BGT7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Smndc1Q8BGT7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Smndc1Q8BGT7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Gm4804-201ENSMUST00000182234 999 ntBASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smndc1Q8BGT7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Mir874-201ENSMUST00000104769 76 ntBASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Gm12490-201ENSMUST00000120255 560 ntBASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smndc1Q8BGT7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms