Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf139Q7TMV1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Gm13736-201ENSMUST00000119272 253 ntBASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Gm11597-201ENSMUST00000121423 964 ntBASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf139Q7TMV1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Gm24231-201ENSMUST00000104315 133 ntBASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Gm13315-201ENSMUST00000120376 991 ntBASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Gm42693-201ENSMUST00000196779 631 ntBASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rnf139Q7TMV1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf139Q7TMV1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms