Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Gm23119-201ENSMUST00000158610 140 ntBASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Gm9540-201ENSMUST00000188230 478 ntBASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Ginm1-202ENSMUST00000065124 300 ntBASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx55Q6ZPL9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.33□□□□□ -0.11
Ddx55Q6ZPL9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx55Q6ZPL9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx55Q6ZPL9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx55Q6ZPL9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx55Q6ZPL9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx55Q6ZPL9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gm14460-201ENSMUST00000121511 639 ntBASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gm8365-201ENSMUST00000197334 648 ntBASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gm43058-201ENSMUST00000197645 625 ntBASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gm5455-201ENSMUST00000058710 715 ntBASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx55Q6ZPL9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm8194-201ENSMUST00000159783 859 ntBASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm44958-201ENSMUST00000203734 736 ntBASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx55Q6ZPL9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms