Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Gm13035-201ENSMUST00000117496 342 ntBASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Gm10051-201ENSMUST00000145209 414 ntBASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Snrnp40Q6PE01 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm13888-201ENSMUST00000119148 422 ntBASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm8285-201ENSMUST00000208293 759 ntBASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm9996-201ENSMUST00000070359 913 ntBASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snrnp40Q6PE01 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms