Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.17□□□□□ -0.3
Smarcd1Q61466 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.17□□□□□ -0.3
Smarcd1Q61466 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Gm22323-201ENSMUST00000103832 109 ntBASIC13.17□□□□□ -0.3
Smarcd1Q61466 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Gm12314-201ENSMUST00000118104 538 ntBASIC13.17□□□□□ -0.3
Smarcd1Q61466 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.17□□□□□ -0.3
Smarcd1Q61466 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd1Q61466 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.16□□□□□ -0.3
Smarcd1Q61466 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.16□□□□□ -0.3
Smarcd1Q61466 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Gm39404-201ENSMUST00000216350 313 ntBASIC13.16□□□□□ -0.3
Smarcd1Q61466 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Gm10076-201ENSMUST00000073238 384 ntBASIC13.16□□□□□ -0.3
Smarcd1Q61466 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.16□□□□□ -0.3
Smarcd1Q61466 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.16□□□□□ -0.3
Smarcd1Q61466 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcd1Q61466 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.15□□□□□ -0.3
Smarcd1Q61466 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.15□□□□□ -0.3
Smarcd1Q61466 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms