Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ift88Q61371 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Ift88Q61371 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Proscos-202ENSMUST00000178990 666 ntBASIC13.98□□□□□ -0.17
Ift88Q61371 Gm27701-201ENSMUST00000184498 110 ntBASIC13.98□□□□□ -0.17
Ift88Q61371 Mir6977-201ENSMUST00000184960 64 ntBASIC13.98□□□□□ -0.17
Ift88Q61371 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ift88Q61371 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.98□□□□□ -0.17
Ift88Q61371 Gm8099-201ENSMUST00000200510 742 ntBASIC13.98□□□□□ -0.17
Ift88Q61371 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.98□□□□□ -0.17
Ift88Q61371 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.98□□□□□ -0.17
Ift88Q61371 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.98□□□□□ -0.17
Ift88Q61371 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.98□□□□□ -0.17
Ift88Q61371 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ift88Q61371 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.98□□□□□ -0.17
Ift88Q61371 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ift88Q61371 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ift88Q61371 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ift88Q61371 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ift88Q61371 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.97□□□□□ -0.17
Ift88Q61371 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Ift88Q61371 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.97□□□□□ -0.17
Ift88Q61371 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.97□□□□□ -0.17
Ift88Q61371 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.97□□□□□ -0.17
Ift88Q61371 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.97□□□□□ -0.17
Ift88Q61371 Gm28911-201ENSMUST00000188837 117 ntBASIC13.97□□□□□ -0.17
Ift88Q61371 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.97□□□□□ -0.17
Ift88Q61371 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ift88Q61371 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ift88Q61371 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Ift88Q61371 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ift88Q61371 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ift88Q61371 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ift88Q61371 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ift88Q61371 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.96□□□□□ -0.17
Ift88Q61371 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.96□□□□□ -0.17
Ift88Q61371 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.96□□□□□ -0.17
Ift88Q61371 Gm16479-201ENSMUST00000121706 932 ntBASIC13.96□□□□□ -0.17
Ift88Q61371 Gm14760-201ENSMUST00000121831 999 ntBASIC13.96□□□□□ -0.17
Ift88Q61371 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
Ift88Q61371 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Gm22121-201ENSMUST00000175148 54 ntBASIC13.96□□□□□ -0.17
Ift88Q61371 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.96□□□□□ -0.17
Ift88Q61371 Gm10576-201ENSMUST00000191927 825 ntBASIC13.96□□□□□ -0.17
Ift88Q61371 Gm37922-201ENSMUST00000195596 455 ntBASIC13.96□□□□□ -0.17
Ift88Q61371 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.96□□□□□ -0.17
Ift88Q61371 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ift88Q61371 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ift88Q61371 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.96□□□□□ -0.18
Ift88Q61371 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.96□□□□□ -0.18
Ift88Q61371 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.96□□□□□ -0.18
Ift88Q61371 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms