Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm17931-201ENSMUST00000208132 634 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm14219-201ENSMUST00000120414 288 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm14760-201ENSMUST00000121831 999 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm7902-201ENSMUST00000198842 947 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.87□□□□□ -0.19
Col11a1Q61245 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col11a1Q61245 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col11a1Q61245 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Col11a1Q61245 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col11a1Q61245 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col11a1Q61245 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.86□□□□□ -0.19
Col11a1Q61245 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col11a1Q61245 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Gm14247-201ENSMUST00000120950 237 ntBASIC13.86□□□□□ -0.19
Col11a1Q61245 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col11a1Q61245 Gm45594-201ENSMUST00000211717 241 ntBASIC13.86□□□□□ -0.19
Col11a1Q61245 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Col11a1Q61245 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.86□□□□□ -0.19
Col11a1Q61245 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.86□□□□□ -0.19
Col11a1Q61245 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col11a1Q61245 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col11a1Q61245 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.86□□□□□ -0.19
Col11a1Q61245 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.85□□□□□ -0.19
Col11a1Q61245 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Gm43610-201ENSMUST00000199117 365 ntBASIC13.85□□□□□ -0.19
Col11a1Q61245 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.85□□□□□ -0.19
Col11a1Q61245 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.85□□□□□ -0.19
Col11a1Q61245 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.85□□□□□ -0.19
Col11a1Q61245 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col11a1Q61245 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.85□□□□□ -0.19
Col11a1Q61245 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col11a1Q61245 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col11a1Q61245 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Gm12990-201ENSMUST00000120372 468 ntBASIC13.85□□□□□ -0.19
Col11a1Q61245 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Gm4862-201ENSMUST00000170405 438 ntBASIC13.85□□□□□ -0.19
Col11a1Q61245 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col11a1Q61245 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms