Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col12a1Q60847 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.16□□□□□ -0.46
Col12a1Q60847 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.16□□□□□ -0.46
Col12a1Q60847 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col12a1Q60847 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.16□□□□□ -0.46
Col12a1Q60847 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.16□□□□□ -0.46
Col12a1Q60847 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col12a1Q60847 Gm25053-201ENSMUST00000103982 133 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm25922-201ENSMUST00000104281 130 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm23119-201ENSMUST00000158610 140 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm24679-201ENSMUST00000158762 111 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm25053-202ENSMUST00000199731 132 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm43854-201ENSMUST00000200418 394 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm29763-201ENSMUST00000205306 616 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.15□□□□□ -0.46
Col12a1Q60847 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Col12a1Q60847 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col12a1Q60847 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm45310-201ENSMUST00000210436 275 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.15□□□□□ -0.46
Col12a1Q60847 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.15□□□□□ -0.46
Col12a1Q60847 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col12a1Q60847 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Col12a1Q60847 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.47
Col12a1Q60847 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.15□□□□□ -0.47
Col12a1Q60847 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Col12a1Q60847 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col12a1Q60847 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col12a1Q60847 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col12a1Q60847 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Col12a1Q60847 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.14□□□□□ -0.47
Col12a1Q60847 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.14□□□□□ -0.47
Col12a1Q60847 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col12a1Q60847 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms