Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm45733-201ENSMUST00000212988 437 ntBASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm5425-201ENSMUST00000214125 459 ntBASIC13.35□□□□□ -0.27
Foxd4Q60688 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm17611-202ENSMUST00000220613 814 ntBASIC13.35□□□□□ -0.27
Foxd4Q60688 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.35□□□□□ -0.27
Foxd4Q60688 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Foxd4Q60688 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.35□□□□□ -0.27
Foxd4Q60688 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm12403-201ENSMUST00000121384 959 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm8602-201ENSMUST00000184045 607 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Foxd4Q60688 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.34□□□□□ -0.27
Foxd4Q60688 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxd4Q60688 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.34□□□□□ -0.27
Foxd4Q60688 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Foxd4Q60688 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Foxd4Q60688 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Foxd4Q60688 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Foxd4Q60688 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Foxd4Q60688 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Foxd4Q60688 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Gm37234-201ENSMUST00000193259 1441 ntBASIC13.33□□□□□ -0.28
Foxd4Q60688 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.33□□□□□ -0.28
Foxd4Q60688 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Gm13792-201ENSMUST00000121350 423 ntBASIC13.33□□□□□ -0.28
Foxd4Q60688 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.33□□□□□ -0.28
Foxd4Q60688 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxd4Q60688 Mir7085-201ENSMUST00000184353 66 ntBASIC13.33□□□□□ -0.28
Foxd4Q60688 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms