Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc88aQ5SNZ0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88aQ5SNZ0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88aQ5SNZ0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88aQ5SNZ0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88aQ5SNZ0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88aQ5SNZ0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88aQ5SNZ0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88aQ5SNZ0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Mir6546-201ENSMUST00000184460 62 ntBASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm42937-201ENSMUST00000197360 752 ntBASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88aQ5SNZ0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm15432-201ENSMUST00000121106 195 ntBASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm32999-201ENSMUST00000192693 562 ntBASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc88aQ5SNZ0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms