Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Gm13600-201ENSMUST00000117949 744 ntBASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Gm15703-201ENSMUST00000120250 880 ntBASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Ksr1-207ENSMUST00000226282 5260 ntBASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Gm45495-201ENSMUST00000200940 1700 ntBASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim41Q5NCC3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm12015-201ENSMUST00000117065 843 ntBASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm12314-201ENSMUST00000118104 538 ntBASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm18734-201ENSMUST00000172937 808 ntBASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm43752-201ENSMUST00000198475 697 ntBASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm39404-201ENSMUST00000216350 313 ntBASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim41Q5NCC3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gm14716-201ENSMUST00000120138 718 ntBASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Rmrp-201ENSMUST00000157463 271 ntBASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gm28882-201ENSMUST00000185504 314 ntBASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gm44651-201ENSMUST00000207343 372 ntBASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gm6867-201ENSMUST00000219165 425 ntBASIC21.95■■□□□ 1.1
Trim41Q5NCC3 AL732506.1-201ENSMUST00000226420 281 ntBASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gm10076-201ENSMUST00000073238 384 ntBASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim41Q5NCC3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms