Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Gm3222-201ENSMUST00000071282 990 ntBASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1brtQ3UNC9 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gm14859-201ENSMUST00000117752 357 ntBASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gm13036-201ENSMUST00000117799 748 ntBASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gm43347-201ENSMUST00000200226 580 ntBASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms