Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lins1Q3U1D0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lins1Q3U1D0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.05■□□□□ 0
Lins1Q3U1D0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lins1Q3U1D0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lins1Q3U1D0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Lins1Q3U1D0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Lins1Q3U1D0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.05■□□□□ 0
Lins1Q3U1D0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lins1Q3U1D0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.05■□□□□ -0
Lins1Q3U1D0 Gm13665-201ENSMUST00000120830 528 ntBASIC15.05■□□□□ -0
Lins1Q3U1D0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lins1Q3U1D0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Lins1Q3U1D0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lins1Q3U1D0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Lins1Q3U1D0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.05■□□□□ -0
Lins1Q3U1D0 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.05■□□□□ -0
Lins1Q3U1D0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.05■□□□□ -0
Lins1Q3U1D0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lins1Q3U1D0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.05■□□□□ -0
Lins1Q3U1D0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lins1Q3U1D0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lins1Q3U1D0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Lins1Q3U1D0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Lins1Q3U1D0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Lins1Q3U1D0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lins1Q3U1D0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Gm11439-201ENSMUST00000118598 409 ntBASIC15.04■□□□□ -0
Lins1Q3U1D0 Gm4909-201ENSMUST00000118749 794 ntBASIC15.04■□□□□ -0
Lins1Q3U1D0 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.04■□□□□ -0
Lins1Q3U1D0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Gm16296-201ENSMUST00000159905 325 ntBASIC15.04■□□□□ -0
Lins1Q3U1D0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.04■□□□□ -0
Lins1Q3U1D0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.04■□□□□ -0
Lins1Q3U1D0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lins1Q3U1D0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lins1Q3U1D0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.03■□□□□ -0
Lins1Q3U1D0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.03■□□□□ -0
Lins1Q3U1D0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm14028-201ENSMUST00000117434 479 ntBASIC15.03■□□□□ -0
Lins1Q3U1D0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.03■□□□□ -0
Lins1Q3U1D0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm27341-201ENSMUST00000183570 106 ntBASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.03■□□□□ -0
Lins1Q3U1D0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.03■□□□□ -0
Lins1Q3U1D0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lins1Q3U1D0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms