Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Sox4Q06831 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.46□□□□□ -0.41
Sox4Q06831 Gm7046-201ENSMUST00000221351 977 ntBASIC12.46□□□□□ -0.41
Sox4Q06831 Gm8227-201ENSMUST00000223306 571 ntBASIC12.46□□□□□ -0.41
Sox4Q06831 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sox4Q06831 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox4Q06831 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox4Q06831 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox4Q06831 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox4Q06831 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox4Q06831 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox4Q06831 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.46□□□□□ -0.42
Sox4Q06831 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sox4Q06831 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.46□□□□□ -0.42
Sox4Q06831 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox4Q06831 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox4Q06831 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.46□□□□□ -0.42
Sox4Q06831 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox4Q06831 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.45□□□□□ -0.42
Sox4Q06831 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm10434-201ENSMUST00000101158 471 ntBASIC12.45□□□□□ -0.42
Sox4Q06831 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm4986-201ENSMUST00000119731 549 ntBASIC12.45□□□□□ -0.42
Sox4Q06831 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm11964-201ENSMUST00000120982 444 ntBASIC12.45□□□□□ -0.42
Sox4Q06831 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.45□□□□□ -0.42
Sox4Q06831 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox4Q06831 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm44405-201ENSMUST00000198952 126 ntBASIC12.45□□□□□ -0.42
Sox4Q06831 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox4Q06831 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm9368-201ENSMUST00000219348 831 ntBASIC12.45□□□□□ -0.42
Sox4Q06831 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.45□□□□□ -0.42
Sox4Q06831 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox4Q06831 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox4Q06831 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox4Q06831 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sox4Q06831 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Sox4Q06831 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox4Q06831 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox4Q06831 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sox4Q06831 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.44□□□□□ -0.42
Sox4Q06831 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Sox4Q06831 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Gm12241-201ENSMUST00000118330 726 ntBASIC12.44□□□□□ -0.42
Sox4Q06831 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox4Q06831 Gm13297-201ENSMUST00000120205 934 ntBASIC12.44□□□□□ -0.42
Sox4Q06831 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Sox4Q06831 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.44□□□□□ -0.42
Sox4Q06831 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox4Q06831 Gm43179-201ENSMUST00000198797 275 ntBASIC12.44□□□□□ -0.42
Sox4Q06831 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox4Q06831 Gm45925-201ENSMUST00000218882 744 ntBASIC12.44□□□□□ -0.42
Sox4Q06831 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.44□□□□□ -0.42
Sox4Q06831 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox4Q06831 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox4Q06831 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox4Q06831 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms