Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.74□□□□□ -0.37
Pfdn6Q03958 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.74□□□□□ -0.37
Pfdn6Q03958 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.74□□□□□ -0.37
Pfdn6Q03958 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Gm37042-201ENSMUST00000193816 581 ntBASIC12.74□□□□□ -0.37
Pfdn6Q03958 Gm4768-201ENSMUST00000206199 686 ntBASIC12.74□□□□□ -0.37
Pfdn6Q03958 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.74□□□□□ -0.37
Pfdn6Q03958 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Mir339-201ENSMUST00000083659 96 ntBASIC12.74□□□□□ -0.37
Pfdn6Q03958 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn6Q03958 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.73□□□□□ -0.37
Pfdn6Q03958 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.73□□□□□ -0.37
Pfdn6Q03958 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.73□□□□□ -0.37
Pfdn6Q03958 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Gm14704-201ENSMUST00000120300 874 ntBASIC12.73□□□□□ -0.37
Pfdn6Q03958 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Gm29705-201ENSMUST00000212598 474 ntBASIC12.73□□□□□ -0.37
Pfdn6Q03958 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.73□□□□□ -0.37
Pfdn6Q03958 Gm10146-201ENSMUST00000072739 309 ntBASIC12.73□□□□□ -0.37
Pfdn6Q03958 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.73□□□□□ -0.37
Pfdn6Q03958 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn6Q03958 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.72□□□□□ -0.37
Pfdn6Q03958 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Gm4271-201ENSMUST00000174444 973 ntBASIC12.72□□□□□ -0.37
Pfdn6Q03958 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.72□□□□□ -0.37
Pfdn6Q03958 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Gm7653-201ENSMUST00000214567 508 ntBASIC12.72□□□□□ -0.37
Pfdn6Q03958 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.72□□□□□ -0.37
Pfdn6Q03958 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms