Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.49□□□□□ -0.73
Ccl21aP84444 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl21aP84444 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Ccl21aP84444 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm13182-201ENSMUST00000122241 312 ntBASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm22144-201ENSMUST00000157402 102 ntBASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm23218-201ENSMUST00000158124 276 ntBASIC10.48□□□□□ -0.73
Ccl21aP84444 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm23771-201ENSMUST00000178702 110 ntBASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm27910-201ENSMUST00000185004 107 ntBASIC10.48□□□□□ -0.73
Ccl21aP84444 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm42518-201ENSMUST00000196277 938 ntBASIC10.48□□□□□ -0.73
Ccl21aP84444 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccl21aP84444 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl21aP84444 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Gm12899-201ENSMUST00000120565 551 ntBASIC10.47□□□□□ -0.73
Ccl21aP84444 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.47□□□□□ -0.73
Ccl21aP84444 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.47□□□□□ -0.73
Ccl21aP84444 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.47□□□□□ -0.73
Ccl21aP84444 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Gm19091-201ENSMUST00000208120 978 ntBASIC10.47□□□□□ -0.73
Ccl21aP84444 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.47□□□□□ -0.73
Ccl21aP84444 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.47□□□□□ -0.73
Ccl21aP84444 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.47□□□□□ -0.73
Ccl21aP84444 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl21aP84444 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms