Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ldb1P70662 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb1P70662 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ldb1P70662 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Ldb1P70662 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ldb1P70662 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Ldb1P70662 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.59□□□□□ -0.39
Ldb1P70662 Gm6222-202ENSMUST00000182143 629 ntBASIC12.59□□□□□ -0.39
Ldb1P70662 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.59□□□□□ -0.39
Ldb1P70662 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ldb1P70662 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.59□□□□□ -0.39
Ldb1P70662 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.59□□□□□ -0.39
Ldb1P70662 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.59□□□□□ -0.39
Ldb1P70662 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ldb1P70662 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.59□□□□□ -0.39
Ldb1P70662 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb1P70662 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ldb1P70662 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ldb1P70662 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ldb1P70662 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Gm14921-201ENSMUST00000118643 908 ntBASIC12.58□□□□□ -0.4
Ldb1P70662 Gm16296-201ENSMUST00000159905 325 ntBASIC12.58□□□□□ -0.4
Ldb1P70662 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ldb1P70662 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ldb1P70662 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Gm38092-201ENSMUST00000195600 653 ntBASIC12.58□□□□□ -0.4
Ldb1P70662 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.58□□□□□ -0.4
Ldb1P70662 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.58□□□□□ -0.4
Ldb1P70662 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ldb1P70662 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb1P70662 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.57□□□□□ -0.4
Ldb1P70662 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ldb1P70662 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.57□□□□□ -0.4
Ldb1P70662 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Ldb1P70662 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb1P70662 Gm11425-201ENSMUST00000119608 498 ntBASIC12.57□□□□□ -0.4
Ldb1P70662 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.57□□□□□ -0.4
Ldb1P70662 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms