Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vbp1P61759 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vbp1P61759 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vbp1P61759 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Vbp1P61759 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vbp1P61759 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vbp1P61759 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Vbp1P61759 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vbp1P61759 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.46□□□□□ -0.57
Vbp1P61759 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.46□□□□□ -0.57
Vbp1P61759 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Vbp1P61759 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.46□□□□□ -0.57
Vbp1P61759 Mir1897-201ENSMUST00000122581 272 ntBASIC11.46□□□□□ -0.57
Vbp1P61759 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.46□□□□□ -0.57
Vbp1P61759 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Vbp1P61759 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Vbp1P61759 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vbp1P61759 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Vbp1P61759 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Vbp1P61759 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Vbp1P61759 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vbp1P61759 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.46□□□□□ -0.58
Vbp1P61759 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Vbp1P61759 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vbp1P61759 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vbp1P61759 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vbp1P61759 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vbp1P61759 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.45□□□□□ -0.58
Vbp1P61759 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vbp1P61759 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Gm24543-201ENSMUST00000103867 82 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Gm11745-201ENSMUST00000121669 448 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Gm17271-201ENSMUST00000165535 355 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.45□□□□□ -0.58
Vbp1P61759 Gm45612-201ENSMUST00000211320 160 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.45□□□□□ -0.58
Vbp1P61759 Gm5425-201ENSMUST00000214125 459 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Gm8227-201ENSMUST00000223306 571 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Gm26035-201ENSMUST00000083065 308 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Cog3-203ENSMUST00000227473 4197 ntBASIC11.45□□□□□ -0.58
Vbp1P61759 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vbp1P61759 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Vbp1P61759 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vbp1P61759 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.44□□□□□ -0.58
Vbp1P61759 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Vbp1P61759 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vbp1P61759 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vbp1P61759 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms