Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.12□□□□□ -0.15
Tpm1P58771 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.12□□□□□ -0.15
Tpm1P58771 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Tpm1P58771 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.12□□□□□ -0.15
Tpm1P58771 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.12□□□□□ -0.15
Tpm1P58771 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.12□□□□□ -0.15
Tpm1P58771 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Tpm1P58771 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Tpm1P58771 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.12□□□□□ -0.15
Tpm1P58771 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tpm1P58771 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tpm1P58771 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.11□□□□□ -0.15
Tpm1P58771 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Tpm1P58771 Gm23935-201ENSMUST00000102303 57 ntBASIC14.11□□□□□ -0.15
Tpm1P58771 Gm24270-201ENSMUST00000102326 57 ntBASIC14.11□□□□□ -0.15
Tpm1P58771 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Tpm1P58771 Gm24245-201ENSMUST00000157318 57 ntBASIC14.11□□□□□ -0.15
Tpm1P58771 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Gm43575-201ENSMUST00000196420 516 ntBASIC14.11□□□□□ -0.15
Tpm1P58771 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Tpm1P58771 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tpm1P58771 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tpm1P58771 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.11□□□□□ -0.15
Tpm1P58771 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm1P58771 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.1□□□□□ -0.15
Tpm1P58771 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.1□□□□□ -0.15
Tpm1P58771 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.1□□□□□ -0.15
Tpm1P58771 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Gm27838-201ENSMUST00000184829 128 ntBASIC14.1□□□□□ -0.15
Tpm1P58771 Gm28760-201ENSMUST00000185995 736 ntBASIC14.1□□□□□ -0.15
Tpm1P58771 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.1□□□□□ -0.15
Tpm1P58771 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Tpm1P58771 Gm6458-201ENSMUST00000211573 635 ntBASIC14.1□□□□□ -0.15
Tpm1P58771 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.1□□□□□ -0.15
Tpm1P58771 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.1□□□□□ -0.15
Tpm1P58771 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm1P58771 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm1P58771 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.1□□□□□ -0.15
Tpm1P58771 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tpm1P58771 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.1□□□□□ -0.15
Tpm1P58771 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.09□□□□□ -0.15
Tpm1P58771 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm1P58771 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms