Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.26□□□□□ -0.13
Rrp1P56183 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.26□□□□□ -0.13
Rrp1P56183 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rrp1P56183 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.26□□□□□ -0.13
Rrp1P56183 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.26□□□□□ -0.13
Rrp1P56183 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rrp1P56183 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rrp1P56183 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rrp1P56183 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rrp1P56183 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.26□□□□□ -0.13
Rrp1P56183 Gm23363-201ENSMUST00000175024 79 ntBASIC14.26□□□□□ -0.13
Rrp1P56183 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.26□□□□□ -0.13
Rrp1P56183 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Gm8227-201ENSMUST00000223306 571 ntBASIC14.26□□□□□ -0.13
Rrp1P56183 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.26□□□□□ -0.13
Rrp1P56183 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rrp1P56183 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.26□□□□□ -0.13
Rrp1P56183 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp1P56183 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rrp1P56183 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rrp1P56183 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Rrp1P56183 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rrp1P56183 Gm13612-201ENSMUST00000119276 390 ntBASIC14.25□□□□□ -0.13
Rrp1P56183 Gm15703-201ENSMUST00000120250 880 ntBASIC14.25□□□□□ -0.13
Rrp1P56183 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.25□□□□□ -0.13
Rrp1P56183 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.25□□□□□ -0.13
Rrp1P56183 Proscos-202ENSMUST00000178990 666 ntBASIC14.25□□□□□ -0.13
Rrp1P56183 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Gm7653-201ENSMUST00000214567 508 ntBASIC14.25□□□□□ -0.13
Rrp1P56183 Gm6180-201ENSMUST00000065243 498 ntBASIC14.25□□□□□ -0.13
Rrp1P56183 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.25□□□□□ -0.13
Rrp1P56183 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Rrp1P56183 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rrp1P56183 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp1P56183 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rrp1P56183 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rrp1P56183 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.24□□□□□ -0.13
Rrp1P56183 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rrp1P56183 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Gm8805-201ENSMUST00000117848 313 ntBASIC14.24□□□□□ -0.13
Rrp1P56183 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.24□□□□□ -0.13
Rrp1P56183 Gm45668-201ENSMUST00000211271 493 ntBASIC14.24□□□□□ -0.13
Rrp1P56183 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.24□□□□□ -0.13
Rrp1P56183 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.24□□□□□ -0.13
Rrp1P56183 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Rrp1P56183 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms