Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Foxa1P35582 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Foxa1P35582 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Foxa1P35582 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.71□□□□□ -0.54
Foxa1P35582 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.7□□□□□ -0.54
Foxa1P35582 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.7□□□□□ -0.54
Foxa1P35582 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.7□□□□□ -0.54
Foxa1P35582 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.7□□□□□ -0.54
Foxa1P35582 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.7□□□□□ -0.54
Foxa1P35582 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Foxa1P35582 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Gm17420-201ENSMUST00000164753 153 ntBASIC11.7□□□□□ -0.54
Foxa1P35582 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.7□□□□□ -0.54
Foxa1P35582 Gm38002-201ENSMUST00000193255 180 ntBASIC11.7□□□□□ -0.54
Foxa1P35582 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Gm22058-201ENSMUST00000083393 310 ntBASIC11.7□□□□□ -0.54
Foxa1P35582 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.7□□□□□ -0.54
Foxa1P35582 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Foxa1P35582 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.7□□□□□ -0.54
Foxa1P35582 Daam2-202ENSMUST00000224595 1926 ntBASIC11.7□□□□□ -0.54
Foxa1P35582 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Foxa1P35582 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Foxa1P35582 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.7□□□□□ -0.54
Foxa1P35582 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxa1P35582 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.69□□□□□ -0.54
Foxa1P35582 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Gm6023-201ENSMUST00000118217 606 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.69□□□□□ -0.54
Foxa1P35582 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.69□□□□□ -0.54
Foxa1P35582 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Gm43133-201ENSMUST00000197472 463 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.69□□□□□ -0.54
Foxa1P35582 Gm19309-201ENSMUST00000218295 205 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Gm9823-201ENSMUST00000051212 327 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.69□□□□□ -0.54
Foxa1P35582 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.69□□□□□ -0.54
Foxa1P35582 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Foxa1P35582 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms