Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.71□□□□□ -0.37
RxrbP28704 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.71□□□□□ -0.37
RxrbP28704 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RxrbP28704 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.71□□□□□ -0.37
RxrbP28704 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RxrbP28704 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RxrbP28704 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
RxrbP28704 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.71□□□□□ -0.38
RxrbP28704 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.71□□□□□ -0.38
RxrbP28704 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RxrbP28704 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.7□□□□□ -0.38
RxrbP28704 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.7□□□□□ -0.38
RxrbP28704 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.7□□□□□ -0.38
RxrbP28704 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.7□□□□□ -0.38
RxrbP28704 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.7□□□□□ -0.38
RxrbP28704 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.7□□□□□ -0.38
RxrbP28704 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.7□□□□□ -0.38
RxrbP28704 Gm28631-201ENSMUST00000190740 334 ntBASIC12.7□□□□□ -0.38
RxrbP28704 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.7□□□□□ -0.38
RxrbP28704 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RxrbP28704 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.7□□□□□ -0.38
RxrbP28704 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RxrbP28704 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RxrbP28704 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.69□□□□□ -0.38
RxrbP28704 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.69□□□□□ -0.38
RxrbP28704 Gm7730-201ENSMUST00000212486 454 ntBASIC12.69□□□□□ -0.38
RxrbP28704 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.69□□□□□ -0.38
RxrbP28704 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.69□□□□□ -0.38
RxrbP28704 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RxrbP28704 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms