Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rb1P13405 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rb1P13405 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Gm14350-201ENSMUST00000116642 640 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Gm13123-201ENSMUST00000122173 492 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.03□□□□□ -0.32
Rb1P13405 Gm25668-201ENSMUST00000157700 129 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.03□□□□□ -0.32
Rb1P13405 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Rb1P13405 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.03□□□□□ -0.32
Rb1P13405 Gm37489-201ENSMUST00000191883 159 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.03□□□□□ -0.32
Rb1P13405 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Gm44069-201ENSMUST00000204898 506 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Gm7046-201ENSMUST00000221351 977 ntBASIC13.03□□□□□ -0.32
Rb1P13405 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.03□□□□□ -0.32
Rb1P13405 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rb1P13405 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.03□□□□□ -0.32
Rb1P13405 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.03□□□□□ -0.32
Rb1P13405 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.02□□□□□ -0.32
Rb1P13405 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rb1P13405 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.32
Rb1P13405 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.02□□□□□ -0.32
Rb1P13405 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rb1P13405 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rb1P13405 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Gm6023-201ENSMUST00000118217 606 ntBASIC13.02□□□□□ -0.33
Rb1P13405 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rb1P13405 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.02□□□□□ -0.33
Rb1P13405 Gm6334-201ENSMUST00000207083 228 ntBASIC13.02□□□□□ -0.33
Rb1P13405 Gm21769-201ENSMUST00000211922 111 ntBASIC13.02□□□□□ -0.33
Rb1P13405 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.02□□□□□ -0.33
Rb1P13405 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.02□□□□□ -0.33
Rb1P13405 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.02□□□□□ -0.33
Rb1P13405 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.02□□□□□ -0.33
Rb1P13405 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.02□□□□□ -0.33
Rb1P13405 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.02□□□□□ -0.33
Rb1P13405 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Rb1P13405 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.02□□□□□ -0.33
Rb1P13405 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rb1P13405 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rb1P13405 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rb1P13405 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rb1P13405 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rb1P13405 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.01□□□□□ -0.33
Rb1P13405 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rb1P13405 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rb1P13405 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rb1P13405 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rb1P13405 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rb1P13405 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rb1P13405 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rb1P13405 Gm15370-201ENSMUST00000117158 253 ntBASIC13.01□□□□□ -0.33
Rb1P13405 Gm16202-201ENSMUST00000117532 544 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms