Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.16□□□□□ -0.46
Msx1P13297 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Gm13123-201ENSMUST00000122173 492 ntBASIC12.16□□□□□ -0.46
Msx1P13297 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Gm16112-201ENSMUST00000159075 382 ntBASIC12.16□□□□□ -0.46
Msx1P13297 Gm5277-201ENSMUST00000164923 556 ntBASIC12.16□□□□□ -0.46
Msx1P13297 Mospd4-201ENSMUST00000180618 576 ntBASIC12.16□□□□□ -0.46
Msx1P13297 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC12.16□□□□□ -0.46
Msx1P13297 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.16□□□□□ -0.46
Msx1P13297 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.16□□□□□ -0.46
Msx1P13297 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Msx1P13297 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.16□□□□□ -0.46
Msx1P13297 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.16□□□□□ -0.46
Msx1P13297 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Msx1P13297 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx1P13297 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Msx1P13297 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Msx1P13297 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Msx1P13297 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Msx1P13297 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Msx1P13297 Gm15061-201ENSMUST00000121076 1046 ntBASIC12.15□□□□□ -0.46
Msx1P13297 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Gm22902-201ENSMUST00000158488 302 ntBASIC12.15□□□□□ -0.46
Msx1P13297 Gm38280-201ENSMUST00000192610 158 ntBASIC12.15□□□□□ -0.46
Msx1P13297 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Gm10297-201ENSMUST00000207136 651 ntBASIC12.15□□□□□ -0.46
Msx1P13297 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
Msx1P13297 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.15□□□□□ -0.46
Msx1P13297 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx1P13297 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Msx1P13297 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Msx1P13297 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Msx1P13297 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Msx1P13297 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Msx1P13297 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Msx1P13297 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Msx1P13297 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Msx1P13297 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msx1P13297 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msx1P13297 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msx1P13297 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Msx1P13297 Gm14350-201ENSMUST00000116642 640 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms