Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.23□□□□□ -0.45
Fv4P11370 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.23□□□□□ -0.45
Fv4P11370 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Fv4P11370 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Gm27331-201ENSMUST00000183705 60 ntBASIC12.23□□□□□ -0.45
Fv4P11370 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.23□□□□□ -0.45
Fv4P11370 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.23□□□□□ -0.45
Fv4P11370 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.23□□□□□ -0.45
Fv4P11370 Gm32025-201ENSMUST00000217960 307 ntBASIC12.23□□□□□ -0.45
Fv4P11370 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.23□□□□□ -0.45
Fv4P11370 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Fv4P11370 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.23□□□□□ -0.45
Fv4P11370 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.23□□□□□ -0.45
Fv4P11370 Daam2-202ENSMUST00000224595 1926 ntBASIC12.23□□□□□ -0.45
Fv4P11370 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.22□□□□□ -0.45
Fv4P11370 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fv4P11370 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.22□□□□□ -0.45
Fv4P11370 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fv4P11370 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fv4P11370 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fv4P11370 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.22□□□□□ -0.45
Fv4P11370 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.22□□□□□ -0.45
Fv4P11370 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.22□□□□□ -0.45
Fv4P11370 Gm4271-201ENSMUST00000174444 973 ntBASIC12.22□□□□□ -0.45
Fv4P11370 Gm9002-201ENSMUST00000178437 499 ntBASIC12.22□□□□□ -0.45
Fv4P11370 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Fv4P11370 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fv4P11370 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.22□□□□□ -0.45
Fv4P11370 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.22□□□□□ -0.45
Fv4P11370 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Gm19163-201ENSMUST00000223313 780 ntBASIC12.22□□□□□ -0.45
Fv4P11370 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fv4P11370 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fv4P11370 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.21□□□□□ -0.45
Fv4P11370 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.21□□□□□ -0.45
Fv4P11370 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.21□□□□□ -0.45
Fv4P11370 Gm12138-201ENSMUST00000122180 951 ntBASIC12.21□□□□□ -0.45
Fv4P11370 Gm12363-201ENSMUST00000122250 668 ntBASIC12.21□□□□□ -0.45
Fv4P11370 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.21□□□□□ -0.45
Fv4P11370 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Gm22331-201ENSMUST00000158066 136 ntBASIC12.21□□□□□ -0.45
Fv4P11370 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.21□□□□□ -0.45
Fv4P11370 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.21□□□□□ -0.45
Fv4P11370 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.21□□□□□ -0.45
Fv4P11370 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.21□□□□□ -0.45
Fv4P11370 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Gm29705-201ENSMUST00000212598 474 ntBASIC12.21□□□□□ -0.45
Fv4P11370 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fv4P11370 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Fv4P11370 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms