Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
UbbP0CG49 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UbbP0CG49 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
UbbP0CG49 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UbbP0CG49 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UbbP0CG49 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UbbP0CG49 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UbbP0CG49 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
UbbP0CG49 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
UbbP0CG49 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UbbP0CG49 Gm15321-201ENSMUST00000121290 288 ntBASIC11.02□□□□□ -0.65
UbbP0CG49 Gm12291-201ENSMUST00000121627 311 ntBASIC11.02□□□□□ -0.65
UbbP0CG49 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.02□□□□□ -0.65
UbbP0CG49 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Gm19184-201ENSMUST00000196798 928 ntBASIC11.02□□□□□ -0.65
UbbP0CG49 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UbbP0CG49 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.02□□□□□ -0.65
UbbP0CG49 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.02□□□□□ -0.65
UbbP0CG49 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.02□□□□□ -0.65
UbbP0CG49 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
UbbP0CG49 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UbbP0CG49 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
UbbP0CG49 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
UbbP0CG49 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UbbP0CG49 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
UbbP0CG49 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
UbbP0CG49 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UbbP0CG49 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
UbbP0CG49 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
UbbP0CG49 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UbbP0CG49 Gm14350-201ENSMUST00000116642 640 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Gm13689-201ENSMUST00000119360 685 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.01□□□□□ -0.65
UbbP0CG49 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
UbbP0CG49 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Syt7-204ENSMUST00000223586 1344 ntBASIC11.01□□□□□ -0.65
UbbP0CG49 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
UbbP0CG49 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UbbP0CG49 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.01□□□□□ -0.65
UbbP0CG49 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
UbbP0CG49 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.01□□□□□ -0.65
UbbP0CG49 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UbbP0CG49 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11□□□□□ -0.65
UbbP0CG49 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11□□□□□ -0.65
UbbP0CG49 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms