Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm43179-201ENSMUST00000198797 275 ntBASIC12.46□□□□□ -0.41
Hoxa4P06798 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxa4P06798 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.46□□□□□ -0.41
Hoxa4P06798 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hoxa4P06798 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hoxa4P06798 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.46□□□□□ -0.42
Hoxa4P06798 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.46□□□□□ -0.42
Hoxa4P06798 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa4P06798 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Paupar-201ENSMUST00000194826 3482 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Pck2-205ENSMUST00000226352 2784 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm14999-201ENSMUST00000121039 624 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm13570-201ENSMUST00000140763 309 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm25043-201ENSMUST00000158604 212 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm23119-201ENSMUST00000158610 140 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm26956-201ENSMUST00000182176 986 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm9022-201ENSMUST00000182482 992 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm6007-201ENSMUST00000208170 823 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Cts7-204ENSMUST00000225321 1257 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.45□□□□□ -0.42
Hoxa4P06798 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hoxa4P06798 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa4P06798 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxa4P06798 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms