Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfrbP05622 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PdgfrbP05622 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.81□□□□□ -0.36
PdgfrbP05622 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
PdgfrbP05622 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm14363-201ENSMUST00000122304 409 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm16296-201ENSMUST00000159905 325 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm6222-202ENSMUST00000182143 629 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm45784-201ENSMUST00000188360 142 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.81□□□□□ -0.36
PdgfrbP05622 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm17872-201ENSMUST00000222550 532 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
PdgfrbP05622 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.81□□□□□ -0.36
PdgfrbP05622 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.81□□□□□ -0.36
PdgfrbP05622 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfrbP05622 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.8□□□□□ -0.36
PdgfrbP05622 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Gm38092-201ENSMUST00000195600 653 ntBASIC12.8□□□□□ -0.36
PdgfrbP05622 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 CT010431.1-201ENSMUST00000221249 1080 ntBASIC12.8□□□□□ -0.36
PdgfrbP05622 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PdgfrbP05622 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfrbP05622 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.8□□□□□ -0.36
PdgfrbP05622 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms