Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm17837-201ENSMUST00000186435 985 ntBASIC11.13□□□□□ -0.63
P04224 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.13□□□□□ -0.63
P04224 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.13□□□□□ -0.63
P04224 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
P04224 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
P04224 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
P04224 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
P04224 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
P04224 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
P04224 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.13□□□□□ -0.63
P04224 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.13□□□□□ -0.63
P04224 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P04224 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.13□□□□□ -0.63
P04224 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.12□□□□□ -0.63
P04224 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
P04224 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
P04224 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P04224 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.12□□□□□ -0.63
P04224 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.12□□□□□ -0.63
P04224 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
P04224 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.12□□□□□ -0.63
P04224 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.12□□□□□ -0.63
P04224 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Gm6736-201ENSMUST00000166583 948 ntBASIC11.12□□□□□ -0.63
P04224 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.12□□□□□ -0.63
P04224 Gm22175-201ENSMUST00000175007 78 ntBASIC11.12□□□□□ -0.63
P04224 Gm27618-201ENSMUST00000183671 60 ntBASIC11.12□□□□□ -0.63
P04224 Gm27702-201ENSMUST00000184512 56 ntBASIC11.12□□□□□ -0.63
P04224 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
P04224 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P04224 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
P04224 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Gm8396-201ENSMUST00000057361 823 ntBASIC11.12□□□□□ -0.63
P04224 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.12□□□□□ -0.63
P04224 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.12□□□□□ -0.63
P04224 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.12□□□□□ -0.63
P04224 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.12□□□□□ -0.63
P04224 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.12□□□□□ -0.63
P04224 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.12□□□□□ -0.63
P04224 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.12□□□□□ -0.63
P04224 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
P04224 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
P04224 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04224 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.12□□□□□ -0.63
P04224 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P04224 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.11□□□□□ -0.63
P04224 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.11□□□□□ -0.63
P04224 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms