Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.6□□□□□ -0.55
P01852 Gm42693-201ENSMUST00000196779 631 ntBASIC11.6□□□□□ -0.55
P01852 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Gm45880-201ENSMUST00000213041 853 ntBASIC11.6□□□□□ -0.55
P01852 Gm19309-201ENSMUST00000218295 205 ntBASIC11.6□□□□□ -0.55
P01852 Gm5781-201ENSMUST00000219792 443 ntBASIC11.6□□□□□ -0.55
P01852 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
P01852 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
P01852 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
P01852 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
P01852 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
P01852 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
P01852 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
P01852 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.59□□□□□ -0.55
P01852 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
P01852 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.59□□□□□ -0.55
P01852 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
P01852 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.59□□□□□ -0.55
P01852 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.59□□□□□ -0.55
P01852 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.59□□□□□ -0.55
P01852 Gm43133-201ENSMUST00000197472 463 ntBASIC11.59□□□□□ -0.55
P01852 Gm43438-201ENSMUST00000198133 379 ntBASIC11.59□□□□□ -0.55
P01852 Gm18054-201ENSMUST00000207539 555 ntBASIC11.59□□□□□ -0.55
P01852 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.59□□□□□ -0.55
P01852 Gm6013-201ENSMUST00000212264 699 ntBASIC11.59□□□□□ -0.55
P01852 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.59□□□□□ -0.55
P01852 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.59□□□□□ -0.55
P01852 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.59□□□□□ -0.55
P01852 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
P01852 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
P01852 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P01852 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
P01852 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.58□□□□□ -0.55
P01852 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
P01852 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.58□□□□□ -0.56
P01852 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Matn2-203ENSMUST00000226766 3252 ntBASIC11.58□□□□□ -0.56
P01852 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.58□□□□□ -0.56
P01852 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.58□□□□□ -0.56
P01852 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.58□□□□□ -0.56
P01852 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.58□□□□□ -0.56
P01852 Gm3890-201ENSMUST00000182416 207 ntBASIC11.58□□□□□ -0.56
P01852 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.58□□□□□ -0.56
P01852 Gm42627-201ENSMUST00000197347 224 ntBASIC11.58□□□□□ -0.56
P01852 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.58□□□□□ -0.56
P01852 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
P01852 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P01852 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms