Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.31□□□□□ -0.6
CcnkO88874 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CcnkO88874 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.31□□□□□ -0.6
CcnkO88874 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Gm15376-201ENSMUST00000122258 783 ntBASIC11.31□□□□□ -0.6
CcnkO88874 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Gm44855-201ENSMUST00000205725 362 ntBASIC11.31□□□□□ -0.6
CcnkO88874 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.31□□□□□ -0.6
CcnkO88874 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CcnkO88874 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.31□□□□□ -0.6
CcnkO88874 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CcnkO88874 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcnkO88874 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.31□□□□□ -0.6
CcnkO88874 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CcnkO88874 Daam2-202ENSMUST00000224595 1926 ntBASIC11.31□□□□□ -0.6
CcnkO88874 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.3□□□□□ -0.6
CcnkO88874 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CcnkO88874 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.3□□□□□ -0.6
CcnkO88874 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Gm27437-201ENSMUST00000183429 107 ntBASIC11.3□□□□□ -0.6
CcnkO88874 Gm38223-201ENSMUST00000194484 695 ntBASIC11.3□□□□□ -0.6
CcnkO88874 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.3□□□□□ -0.6
CcnkO88874 Gm42550-201ENSMUST00000201553 960 ntBASIC11.3□□□□□ -0.6
CcnkO88874 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CcnkO88874 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CcnkO88874 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.3□□□□□ -0.6
CcnkO88874 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.3□□□□□ -0.6
CcnkO88874 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.3□□□□□ -0.6
CcnkO88874 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
CcnkO88874 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.3□□□□□ -0.6
CcnkO88874 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CcnkO88874 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcnkO88874 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms