Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Gm11524-201ENSMUST00000119349 807 ntBASIC11.69□□□□□ -0.54
Cops4O88544 Gm14057-201ENSMUST00000120631 482 ntBASIC11.69□□□□□ -0.54
Cops4O88544 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Cops4O88544 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.69□□□□□ -0.54
Cops4O88544 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.69□□□□□ -0.54
Cops4O88544 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.69□□□□□ -0.54
Cops4O88544 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.69□□□□□ -0.54
Cops4O88544 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
Cops4O88544 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.68□□□□□ -0.54
Cops4O88544 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.68□□□□□ -0.54
Cops4O88544 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Syt7-204ENSMUST00000223586 1344 ntBASIC11.68□□□□□ -0.54
Cops4O88544 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.68□□□□□ -0.54
Cops4O88544 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Gm29608-201ENSMUST00000190444 463 ntBASIC11.68□□□□□ -0.54
Cops4O88544 Gm19078-201ENSMUST00000206311 727 ntBASIC11.68□□□□□ -0.54
Cops4O88544 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.68□□□□□ -0.54
Cops4O88544 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.68□□□□□ -0.54
Cops4O88544 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cops4O88544 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cops4O88544 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cops4O88544 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cops4O88544 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cops4O88544 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cops4O88544 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.67□□□□□ -0.54
Cops4O88544 Gm15321-201ENSMUST00000121290 288 ntBASIC11.67□□□□□ -0.54
Cops4O88544 Gm15376-201ENSMUST00000122258 783 ntBASIC11.67□□□□□ -0.54
Cops4O88544 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.67□□□□□ -0.54
Cops4O88544 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Gm26464-201ENSMUST00000157094 305 ntBASIC11.67□□□□□ -0.54
Cops4O88544 Gm9630-201ENSMUST00000178304 885 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms