Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Ldb2O55203 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ldb2O55203 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ldb2O55203 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.58□□□□□ -0.4
Ldb2O55203 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ldb2O55203 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.57□□□□□ -0.4
Ldb2O55203 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ldb2O55203 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.57□□□□□ -0.4
Ldb2O55203 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ldb2O55203 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ldb2O55203 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Gm24548-201ENSMUST00000158650 108 ntBASIC12.57□□□□□ -0.4
Ldb2O55203 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ldb2O55203 Gm5781-201ENSMUST00000219792 443 ntBASIC12.57□□□□□ -0.4
Ldb2O55203 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.57□□□□□ -0.4
Ldb2O55203 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Ldb2O55203 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ldb2O55203 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ldb2O55203 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ldb2O55203 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ldb2O55203 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.56□□□□□ -0.4
Ldb2O55203 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ldb2O55203 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ldb2O55203 Gm24231-201ENSMUST00000104315 133 ntBASIC12.56□□□□□ -0.4
Ldb2O55203 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.56□□□□□ -0.4
Ldb2O55203 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.56□□□□□ -0.4
Ldb2O55203 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.56□□□□□ -0.4
Ldb2O55203 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.56□□□□□ -0.4
Ldb2O55203 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.56□□□□□ -0.4
Ldb2O55203 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.56□□□□□ -0.4
Ldb2O55203 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.56□□□□□ -0.4
Ldb2O55203 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.56□□□□□ -0.4
Ldb2O55203 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.56□□□□□ -0.4
Ldb2O55203 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Gm22058-201ENSMUST00000083393 310 ntBASIC12.56□□□□□ -0.4
Ldb2O55203 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ldb2O55203 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.56□□□□□ -0.4
Ldb2O55203 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ldb2O55203 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.56□□□□□ -0.4
Ldb2O55203 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ldb2O55203 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ldb2O55203 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ldb2O55203 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ldb2O55203 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.55□□□□□ -0.4
Ldb2O55203 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ldb2O55203 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms