Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Gm38223-201ENSMUST00000194484 695 ntBASIC11.53□□□□□ -0.56
Shisa8J3QNX5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.53□□□□□ -0.56
Shisa8J3QNX5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Gm26035-201ENSMUST00000083065 308 ntBASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Shisa8J3QNX5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Shisa8J3QNX5 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Gm27306-201ENSMUST00000183970 107 ntBASIC11.52□□□□□ -0.57
Shisa8J3QNX5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Shisa8J3QNX5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms