Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.4□□□□□ -0.59
Pcdh1F7BJK1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh1F7BJK1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh1F7BJK1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Gm14921-201ENSMUST00000118643 908 ntBASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Gm12341-201ENSMUST00000119724 503 ntBASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Gm8227-201ENSMUST00000223306 571 ntBASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh1F7BJK1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Gm5866-201ENSMUST00000177881 973 ntBASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Gm28631-201ENSMUST00000190740 334 ntBASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms