Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Matn2-206ENSMUST00000228570 2798 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gm12419-201ENSMUST00000116649 636 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gm11663-201ENSMUST00000117888 290 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gm11836-201ENSMUST00000121022 441 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gm37299-201ENSMUST00000193951 826 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gm38117-201ENSMUST00000194653 939 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm22920-201ENSMUST00000102175 109 ntBASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm25076-201ENSMUST00000104098 132 ntBASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm3150-201ENSMUST00000166418 204 ntBASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm8815-201ENSMUST00000173809 620 ntBASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm44329-201ENSMUST00000197469 112 ntBASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col4a6B1AVK5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm25880-201ENSMUST00000104331 132 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm24844-201ENSMUST00000158679 127 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Mir6998-201ENSMUST00000183343 64 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms